Microbial Community & Functional Analysis
Through metagenomic analysis, we visualize the complex functions of microbial communities in environments such as waste treatment and soil. We provide data-driven solutions to optimize and enhance these natural biological processes.
Service Workflow
Phase 1. Consultation & Inquiry
Please feel free to contact us. Our specialists will propose the most effective analytical methods tailored to your specific research goals.
Phase 2. Sampling & DNA Extraction
We develop a customized sampling strategy based on your research objectives and target environment. We use tailored protocols for DNA extraction and purification to minimize contamination and preserve microbial diversity, specifically optimized for your chosen sequencing method.
Estimated Timeline: 1–2 weeks
In-depth objective analysis and consultation
Formulation of customized sampling plans
Environmental sample collection
High-quality DNA extraction and QC assessment tailored to objectives
Phase 3. Sequencing Data Acquisition
Using the latest NGS platforms, we execute high-precision sequencing. We offer several options: 16S rRNA full-length amplicons for high-resolution taxonomy, shotgun metagenomics (short/long-read) for functional potential, or a hybrid approach for comprehensive genomic reconstruction.
Estimated Timeline: 2–3 weeks
Selection and optimization of sequencing methods (16S / Shotgun / Hybrid)
Execution of high-quality library preparation and sequencing
Initial data quality assessment and QC reporting
Status reporting and coordination for the next stage
Phase 4. Data Analysis & Microbiome Profiling
We analyze the data using cutting-edge bioinformatics pipelines. Depending on the method, we perform taxonomic identification, metabolic pathway estimation, or MAG (Metagenome-Assembled Genome) analysis to reconstruct high-quality genomes from uncultured microbes and correlate them with environmental factors.
Estimated Timeline: 3–4 weeks
Construction of optimized analysis pipelines for the selected method
High-precision taxonomic and functional profiling
Statistical analysis to detect significant correlations and variances
MAG construction and functional estimation for unknown microbes
Integrated analysis with environmental factors
Phase 5. Interpretation & Reporting
We provide a detailed biological interpretation of the microbial community structure and function. Our experts offer insights into ecological significance and environmental correlations, delivering customized reports with advanced visualizations and strategic proposals for your next research steps.
Estimated Timeline: 2–3 weeks
Comprehensive interpretation of microbial community structure and function
Correlation analysis with environmental factors and ecological insights
Detailed analysis of novel microbes and functions
Advanced data visualization and comprehensive reporting
Follow-up support and strategic R&D proposals